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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800641.1_cds_XP_016470875.1_6284
CDS Infomation

[gene=LOC107793088] [db_xref=GeneID:107793088] [protein=protein-tyrosine-phosphatase PTP1-like isoform X2] [protein_id=XP_016470875.1] [location=join(89425..89652,105208..105304,105393..105475,105600..105734,107009..107143,108636..108784,108873..109014,111884..111967)] [gbkey=CDS]
Sequence

ATGGCTGCCGCCGGTAATCCCTTATCCTCCGCCACCACATCCACGGAGCAGCCTGCTACT
GCCACGGGCACTGTCACAAAACCTTTGGATTTCTCTGCTGATTCGGTTCCAAAGAGAATT
GTGCTGTCGCCTGATCAGCGTAGTTACTGTTTGGAAGCACTCACAGCCTTTAAGGAGAAA
AGGTGTCACTCTCCTGGCAAAATTGACTCAGAATTCTCTGTTTTGCAGAAAAATAGGTTG
AAAGCTTCAGAGATGAAAAGTAGATGCTCGGTGGCTTTGGACAGCACAAACATCAGCAAA
AATCGTTATACTGATGTTCTGCCATTTGACAATAGTAGGGTCGTTTTGGACCCATGTAAA
GACTATAGACCTTCAGCTAGGGGATATATCAATGCAAGCTTTGTATCGATATCTGAAAGG
GTGTCCCGGTTTATTGCAACACAAGGTCCACTACCACACACCTTTGAAGACTTCTGGGAA
ATGATTATTCAGAATCGCTGTCCTGTGATTGTGATGCTTACACGATTGGTTGACAATTAC
AAGACGGTGAAGTGTGGGGATTACTTTCAGGCAGAGGATGGGCCTAGAACATTTGGCAAT
ATATGTGTTGTGACGAAATGTATAAAGACGAGTGATACCTCCTTAATATTACGAAATCTG
GAGGTGAACTATATTGAGTCAGAAGAACCACCTTCGCATGTTTTACACATTCAGTATCCT
GAATGGCCTGATCATGGAGTTCCAGAGGACACACTTGCTGTTCGTGAAATTCTGAATCGA
ACACACGATGTGCCTCTTAGTCTTGGACCAATTGTAGTACACTGCAGTGCAGGTATTGGT
AGGACAGGAACATATTGCACAATCCATAATACCATCCAGAGAATACTGGGTGGAGATATG
TCTGCTCTGGATATTGTTAATACTGTAGCCATCTTTAGGTCTCAACGAATTGGAATGGTT
CAGACCATGGATCAATACCTTTTCTGTTATGATGCCATTATTGATGAACTGGAACACCTC
ATCTCAGATGACAATGGAGAGAAGACTCCATAA

Peptide Sequence

PEP ID

XP_016470875.1
PEP Infomation

PREDICTED: protein-tyrosine-phosphatase PTP1-like isoform X2 [Nicotiana tabacum]
Sequence

MAAAGNPLSSATTSTEQPATATGTVTKPLDFSADSVPKRIVLSPDQRSYCLEALTAFKEK
RCHSPGKIDSEFSVLQKNRLKASEMKSRCSVALDSTNISKNRYTDVLPFDNSRVVLDPCK
DYRPSARGYINASFVSISERVSRFIATQGPLPHTFEDFWEMIIQNRCPVIVMLTRLVDNY
KTVKCGDYFQAEDGPRTFGNICVVTKCIKTSDTSLILRNLEVNYIESEEPPSHVLHIQYP
EWPDHGVPEDTLAVREILNRTHDVPLSLGPIVVHCSAGIGRTGTYCTIHNTIQRILGGDM
SALDIVNTVAIFRSQRIGMVQTMDQYLFCYDAIIDELEHLISDDNGEKTP

Transcript Sequence

Gene sequence data has not been registered.